A Poisson model for gapped local alignments

DOI10.1016/S0167-7152(02)00283-3zbMath1014.92026MaRDI QIDQ1871317

Anton Wakolbinger, Dirk Metzler, Steffen Grossmann

Publication date: 7 May 2003

Published in: Statistics \& Probability Letters (Search for Journal in Brave)

zbMATH Keywords

Poisson modelsequence alignmentsgapped local alignmentshigh score asymptotics

Mathematics Subject Classification ID

Nonparametric hypothesis testing (62G10) Applications of statistics to biology and medical sciences; meta analysis (62P10) Signal detection and filtering (aspects of stochastic processes) (60G35) Protein sequences, DNA sequences (92D20)

Related Items (3)

Simultaneous confidence band for the difference of regression functions of two samples ⋮ Predicting RNA secondary structures with pseudoknots by MCMC sampling ⋮ Compound Poisson approximation for regularly varying fields with application to sequence alignment

Cites Work

• Sequence comparison significance and Poisson approximation
• Approximate \(p\)-values for local sequence alignments.
• Limit distribution of maximal non-aligned two-sequence segmental score

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