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A non-local gap-penalty for profile alignment - MaRDI portal

A non-local gap-penalty for profile alignment

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Publication:1915165

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DOI10.1007/BF02458279zbMath0851.92012OpenAlexW4231874197WikidataQ56446199 ScholiaQ56446199MaRDI QIDQ1915165

William R. Taylor

Publication date: 6 November 1996

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/bf02458279

zbMATH Keywords

algorithm dynamic programming approximations optimal alignment alignment of biological sequences alignment scoring alignment-path sum aspartyl proteases gap-penalty length-difference function protein families

Mathematics Subject Classification ID

Applications of mathematical programming (90C90) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

Uses Software

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