Efficient codon optimization with motif engineering

DOI10.1016/J.JDA.2012.04.017zbMath1255.92010OpenAlexW2172617180MaRDI QIDQ1932358

Anne Condon, Chris Thachuk

Publication date: 18 January 2013

Published in: Journal of Discrete Algorithms (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jda.2012.04.017

zbMATH Keywords

dynamic programmingsequence designcodon optimizationmotif engineering

Mathematics Subject Classification ID

Combinatorics on words (68R15) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Computing methodologies for text processing; mathematical typography (68U15)

Related Items (1)

Codon optimization by 0-1 linear programming

Uses Software

• Codon
• UpGene
• JCat
• GeMS
• OPTIMIZER
• Gene Designer
• Synthetic Gene Designer

Cites Work

• Unnamed Item
• Efficient Codon Optimization with Motif Engineering
• Algorithms on Strings, Trees and Sequences

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