Identification of repeats in DNA sequences using nucleotide distribution uniformity

DOI10.1016/J.JTBI.2016.10.013zbMath1368.92064arXiv1608.00567OpenAlexW2963064072WikidataQ36183616 ScholiaQ36183616MaRDI QIDQ2013527

Changchuan Yin

Publication date: 8 August 2017

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1608.00567

zbMATH Keywords

DNA sequencegenomedistribution uniformityrepetitive elements

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

Related Items (2)

Latent periodicity-2 in coronavirus SARS-CoV-2 genome: evolutionary implications ⋮ DNADU

Uses Software

• Python
• RepeatMasker
• PPS
• GitHub

Cites Work

• Periodic power spectrum with applications in detection of latent periodicities in DNA sequences
• Information decomposition method to analyze symbolical sequences
• Detection and visualization of tandem repeats in dna sequences
• Unnamed Item
• Unnamed Item

This page was built for publication: Identification of repeats in DNA sequences using nucleotide distribution uniformity