DNA sequence reconstruction based on innovated hybridization technique of probabilistic cellular automata and particle swarm optimization

DOI10.1016/j.ins.2020.08.102zbMath1478.92144OpenAlexW3082385181WikidataQ99207841 ScholiaQ99207841MaRDI QIDQ2056340

Mohammed Elmogy, Beih S. El-Desouky, Wesam M. Elsayed

Publication date: 2 December 2021

Published in: Information Sciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.ins.2020.08.102

zbMATH Keywords

computational biologymutation ratesparticle swarm optimization (PSO)DNA sequence reconstructionprobabilistic cellular automata (PCA)

Mathematics Subject Classification ID

Approximation methods and heuristics in mathematical programming (90C59) Protein sequences, DNA sequences (92D20) Cellular automata (computational aspects) (68Q80) Computational methods for problems pertaining to biology (92-08)

Uses Software

• Matlab
• fastDNAml
• Mesquite
• T-REX

Cites Work

• Unnamed Item
• Cellular particle swarm optimization
• Regular biosequence pattern matching with cellular automata

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