Counting unique molecular identifiers in sequencing using a multi-type branching process with immigration

DOI10.1016/j.jtbi.2022.111365zbMath1504.92092arXiv2205.06405OpenAlexW4309370192MaRDI QIDQ2109343

Anders Ståhlberg, Serik Sagitov

Publication date: 20 December 2022

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/2205.06405

zbMATH Keywords

sequencinggrowing immigrationPCR amplification ratePCR branching processtree-bookkeepingunique molecular identifier

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Cites Work

• The structure of the allelic partition of the total population for Galton-Watson processes with neutral mutations
• Homogeneous branching processes with non-homogeneous immigration
• Random variation and concentration effects in PCR
• Estimation of the reaction efficiency in polymerase chain reaction
• Branching Processes
• Branching processes in biology
• Unnamed Item

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