Approximate hashing for bioinformatics

DOI10.1007/978-3-030-79121-6_15OpenAlexW3166604620MaRDI QIDQ2117679

Shmuel T. Klein, Guy Arbitman, Pierre Peterlongo, Dana Shapira

Publication date: 22 March 2022

Full work available at URL: https://hal.inria.fr/hal-03166000

Mathematics Subject Classification ID

Formal languages and automata (68Q45)

Uses Software

• Cd-hit

Cites Work

• Unnamed Item
• Similarity based deduplication with small data chunks
• Efficient randomized pattern-matching algorithms
• Faster algorithms for string matching with k mismatches
• A randomized algorithm for approximate string matching

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