BioFVM-X: an MPI+OpenMP 3-D simulator for biological systems

DOI10.1007/978-3-030-85633-5_18zbMath1491.92065OpenAlexW3200584885MaRDI QIDQ2142129

Alfonso Valencia, Miguel Ponce-de-Leon, Gaurav Saxena, David Vicente Dorca, Arnau Montagud

Publication date: 25 May 2022

Full work available at URL: https://doi.org/10.1007/978-3-030-85633-5_18

zbMATH Keywords

MPIparallelizationOpenMPmulti-scale modelingshared-memorydistributed-memorylattice-free modeling

Mathematics Subject Classification ID

Software, source code, etc. for problems pertaining to biology (92-04) Systems biology, networks (92C42) Pathology, pathophysiology (92C32)

Related Items (1)

BioFVM-X

Uses Software

• Chaste
• hypre
• SPRNG
• PETSc
• Chombo
• Global Arrays
• Zoltan
• Intel TBB
• PhysiCell
• Biocellion
• PaScaL_TDMA
• BioFVM

Cites Work

• A Multigrid Tutorial, Second Edition
• An Introduction to Numerical Analysis
• PaScaL\_TDMA: a library of parallel and scalable solvers for massive tridiagonal systems
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