A hidden Markov model to estimate homozygous-by-descent probabilities associated with nested layers of ancestors

DOI10.1016/j.tpb.2022.03.001OpenAlexW4220990299WikidataQ126367449 ScholiaQ126367449MaRDI QIDQ2152684

Mathieu Gautier, Tom Druet

Publication date: 11 July 2022

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2022.03.001

zbMATH Keywords

hidden Markov modelinbreedingautozygosityhomozygous-by-descentROH

Mathematics Subject Classification ID

Biology and other natural sciences (92-XX)

Uses Software

• R
• PLINK
• ARGON
• BCFtools
• RZooRoH

Cites Work

• Hidden Markov Models for Time Series
• Unnamed Item

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