Challenges for machine learning in RNA-protein interaction prediction

DOI10.1515/sagmb-2021-0087zbMath1494.92048OpenAlexW4206905250MaRDI QIDQ2162489

Viplove Arora, Guido Sanguinetti

Publication date: 8 August 2022

Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1515/sagmb-2021-0087

zbMATH Keywords

noisy datagraphshigher-order interactionsRNA-protein interactionsgraph neural networks

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Biochemistry, molecular biology (92C40)

Uses Software

• darch
• idr
• word2vec
• Puma

Cites Work

• Unnamed Item
• Measuring reproducibility of high-throughput experiments
• Networks beyond pairwise interactions: structure and dynamics
• Gene regulatory networks. Methods and protocols
• Support-vector networks
• A gentle introduction to deep learning for graphs
• Reducing the Dimensionality of Data with Neural Networks
• Random forests

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