CLMB: deep contrastive learning for robust metagenomic binning

DOI10.1007/978-3-031-04749-7_23zbMath1496.92078arXiv2111.09656OpenAlexW3212976670MaRDI QIDQ2170167

Yanyan Li

Publication date: 30 August 2022

Full work available at URL: https://arxiv.org/abs/2111.09656

zbMATH Keywords

noisedeep learningcontrastive learningmetagenomic binningsequence clustering

Mathematics Subject Classification ID

Artificial neural networks and deep learning (68T07) Protein sequences, DNA sequences (92D20)

Related Items (1)

CLMB

Uses Software

• Adam
• t-SNE
• GitHub
• MEGAHIT
• iTOL
• BWA
• metaGEM
• fastp
• DLBI
• GTDB-Tk
• CheckM
• Binning_refiner
• MetaWRAP
• MaxBin
• MetaBAT
• HMD-ARG

Cites Work

• Unnamed Item
• Unnamed Item
• metaGEM
• fastp
• DLBI
• GTDB-Tk
• CheckM
• Binning_refiner
• MetaWRAP
• Principal component analysis: a review and recent developments
• HMD-ARG

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