Optimizing weighted gene co-expression network analysis with a multi-threaded calculation of the topological overlap matrix

DOI10.1515/SAGMB-2021-0025zbMath1496.92026OpenAlexW3211368212MaRDI QIDQ2170543

Yanyan Li

Publication date: 6 September 2022

Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1515/sagmb-2021-0025

zbMATH Keywords

graph theoryparallel computingadjacency matrixtopological overlap matrixweighted gene co-expression network

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

Cites Work

• Equitability, mutual information, and the maximal information coefficient

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