Reconstructing metabolic flux vectors from extreme pathways: defining the \(\alpha\)-spectrum

DOI10.1016/S0022-5193(03)00168-1zbMath1464.92113OpenAlexW1966392395WikidataQ46083927 ScholiaQ46083927MaRDI QIDQ2177359

Sharon J. Wiback, Bernhard Ø. Palsson, Radhakrishnan Mahadevan

Publication date: 6 May 2020

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/s0022-5193(03)00168-1

zbMATH Keywords

elementary flux modehuman red blood cellextreme pathway analysis\textit{in silico} modelpathway-based perspective

Mathematics Subject Classification ID

Mixed integer programming (90C11) Cell biology (92C37) Systems biology, networks (92C42)

Related Items (9)

Pathway analysis of liver metabolism under stressed condition ⋮ Monte Carlo sampling can be used to determine the size and shape of the steady-state flux space ⋮ A Markov constraint to uniquely identify elementary flux mode weights in unimolecular metabolic networks ⋮ Multiscale Flux-Based Modeling of Biofilm Communities ⋮ An interval approach for dealing with flux distributions and elementary modes activity patterns ⋮ Bayesian flux balance analysis applied to a skeletal muscle metabolic model ⋮ Metabolic network analysis of perfused livers under fed and fasted states: incorporating thermodynamic and futile-cycle-associated regulatory constraints ⋮ Finding MEMo: minimum sets of elementary flux modes ⋮ Stoichiometric and Constraint-Based Analysis of Biochemical Reaction Networks

Cites Work

• Constraints-based models: regulation of gene expression reduces the steady-state solution space
• Unnamed Item

This page was built for publication: Reconstructing metabolic flux vectors from extreme pathways: defining the \(\alpha\)-spectrum