Extracting characteristic properties of fitness landscape from \textit{in vitro} molecular evolution: a case study on infectivity of fd phage to \textit{E. coli}

DOI10.1016/J.JTBI.2006.12.037zbMath1451.92218OpenAlexW1971902669WikidataQ33275054 ScholiaQ33275054MaRDI QIDQ2210086

Yuzuru Husimi, Hitoshi Toyota, Yuuki Hayashi, Tetsuya Yomo, Itaru Urabe, Takuyo Aita

Publication date: 5 November 2020

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2006.12.037

zbMATH Keywords

sequence spaceadaptive walkfitness landscape\textit{in vitro} evolutionNK model

Mathematics Subject Classification ID

Problems related to evolution (92D15)

Related Items (4)

Biophysical connection between evolutionary dynamics and thermodynamics in \textit{in vitro} evolution ⋮ Fitting protein-folding free energy landscape for a certain conformation to an NK fitness landscape ⋮ Hierarchical distribution of ascending slopes, nearly neutral networks, highlands, and local optima at the \(d\)th order in an NK fitness landscape ⋮ Evolutionary dynamics of a polymorphic self-replicator population with a finite population size and hyper mutation rate

Cites Work

• Unnamed Item
• Thermodynamical interpretation of evolutionary dynamics on a fitness landscape in a evolution reactor. I
• Thermodynamical interpretation of an adaptive walk on a Mt. Fuji-type fitness landscape: Einstein relation-like formula holds in a stochastic evolution
• Adaptive walks by the fittest among finite random mutants on a Mt. Fuji-type fitness landscape. II: Effect of small non-additivity

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