Incorporating LASSO effects into a mixed model for quantitative trait loci detection

DOI10.1198/108571107X200396zbMath1306.62275OpenAlexW2045396767MaRDI QIDQ2259673

Wayne S. Pitchford, Scott D. Foster, Arūnas P. Verbyla

Publication date: 5 March 2015

Published in: Journal of Agricultural, Biological, and Environmental Statistics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1198/108571107x200396

zbMATH Keywords

subset selectionrestricted likelihoodadjusted scorespartial Laplace approximationquantitative trial loci

Mathematics Subject Classification ID

Applications of statistics to environmental and related topics (62P12)

Related Items (6)

Subset Selection for Linear Mixed Models ⋮ Estimating effects and making predictions from genome-wide marker data ⋮ Incorporating LASSO effects into a mixed model for quantitative trait loci detection ⋮ Identifying QTLs and epistasis in structured plant populations using adaptive mixed LASSO ⋮ Sparse variational analysis of linear mixed models for large data sets ⋮ Model selection in linear mixed models

Uses Software

• QTL Express

Cites Work

• Incorporating LASSO effects into a mixed model for quantitative trait loci detection
• ASYMPTOTIC LIKELIHOOD APPROXIMATIONS USING A PARTIAL LAPLACE APPROXIMATION
• Average Information REML: An Efficient Algorithm for Variance Parameter Estimation in Linear Mixed Models
• A Model Selection Approach for the Identification of Quantitative Trait Loci in Experimental Crosses
• Recovery of inter-block information when block sizes are unequal
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