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Lightweight metagenomic classification via eBWT - MaRDI portal

Lightweight metagenomic classification via eBWT

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Publication:2315507

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DOI10.1007/978-3-030-18174-1_8zbMath1416.92130OpenAlexW2945220023MaRDI QIDQ2315507

Giovanna Rosone, Veronica Guerrini

Publication date: 25 July 2019

Full work available at URL: http://hdl.handle.net/11568/994961

zbMATH Keywords

classification alignment-free next-generation sequencing LCP array metagenomics assembly-free eBWT

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)

Related Items (3)

Computing the original eBWT faster, simpler, and with less memory ⋮ Space-efficient construction of compressed suffix trees ⋮ A simple algorithm for computing the document array

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