MULKSG: \textit{MUL}tiple \textit{K} \textit{S}imultaneous \textit{G}raph assembly

DOI10.1007/978-3-030-18174-1_9zbMath1416.92120OpenAlexW2956692023WikidataQ126367457 ScholiaQ126367457MaRDI QIDQ2315511

Christopher Wright, Milind Kulkarni, Sriram Krishnamoorty

Publication date: 25 July 2019

Full work available at URL: https://doi.org/10.1007/978-3-030-18174-1_9

zbMATH Keywords

genome assemblyiterative assemblymulti K assemblyparallel de Bruijn graph

Mathematics Subject Classification ID

Applications of graph theory (05C90) Parallel algorithms in computer science (68W10) Genetics and epigenetics (92D10)

Related Items (1)

MULKSG

Uses Software

• ARACHNE
• CAP3
• GAGE
• Python
• SPAdes
• Velvet
• SOAPdenovo
• IDBA-UD
• QUAST
• ABySS
• GitHub
• MEGAHIT
• Phusion

Cites Work

• QUAST

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