Finding MEMo: minimum sets of elementary flux modes

DOI10.1007/s00285-019-01409-5zbMath1425.92092OpenAlexW2957657377MaRDI QIDQ2330632

Annika Röhl, Alexander Bockmayr

Publication date: 22 October 2019

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1101/705012

zbMATH Keywords

polyhedral conemetabolic networkminimal generating setelementary flux modesmetabolic pathway analysissteady-state flux cone

Mathematics Subject Classification ID

Cell biology (92C37) Systems biology, networks (92C42)

Related Items (2)

On the geometry of elementary flux modes ⋮ Finding MEMo: minimum sets of elementary flux modes

Uses Software

• cdd
• Metatool
• KEGG
• polco
• efmtool
• MEMo

Cites Work

• Unnamed Item
• Unnamed Item
• A new constraint-based description of the steady-state flux cone of metabolic networks
• Reaction routes in biochemical reaction systems: algebraic properties, validated calculation procedure and example from nucleotide metabolism
• Reconstructing metabolic flux vectors from extreme pathways: defining the \(\alpha\)-spectrum
• An interval approach for dealing with flux distributions and elementary modes activity patterns
• Finding MEMo: minimum sets of elementary flux modes

This page was built for publication: Finding MEMo: minimum sets of elementary flux modes