Polymer physics of nuclear organization and function

DOI10.1016/j.physrep.2017.02.002zbMath1366.82074OpenAlexW2521872873WikidataQ58051970 ScholiaQ58051970MaRDI QIDQ2364240

David Holcman, A. Amitai

Publication date: 18 July 2017

Published in: Physics Reports (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1101/076661

zbMATH Keywords

aggregationmodelingFokker-Planck equationclusteringstochastic processesfirst passage timesstochastic simulationsboundary layerasymptotic formuladiffusion processesanomalous diffusionmean square displacementpolymer modelshomologous recombinationpotential wellseigenvalue expansionchromatinDNA repairsearch timeloopingnarrow escape theorychromosomal capture datacoarse-grained analysisHi-C analysisnucleus organizationsingle particle trajectoriesTelomeresTethering force

Mathematics Subject Classification ID

Diffusion (76R50) Statistical mechanics of polymers (82D60) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Diffusion processes (60J60) Cell biology (92C37) Fokker-Planck equations (35Q84)

Uses Software

• ImageJ
• Icy

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