Consistency and convergence rate of phylogenetic inference via regularization

DOI10.1214/17-AOS1592zbMath1395.05036arXiv1606.03059WikidataQ57824331 ScholiaQ57824331MaRDI QIDQ2413597

Vu Dinh, Marc A. Suchard, Frederick A. IV Matsen, Lam Si Tung Ho

Publication date: 14 September 2018

Published in: The Annals of Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1606.03059

zbMATH Keywords

regularizationmaximum likelihood estimatorphylogeneticsspecies treetree reconstructiongene tree

Mathematics Subject Classification ID

Asymptotic properties of parametric estimators (62F12) Trees (05C05) Problems related to evolution (92D15) Applications of graph theory (05C90) Taxonomy, cladistics, statistics in mathematical biology (92B10)

Related Items (4)

Convergence of maximum likelihood supertree reconstruction ⋮ Estimation of cell lineage trees by maximum-likelihood phylogenetics ⋮ Nonbifurcating Phylogenetic Tree Inference via the Adaptive LASSO ⋮ Ancestral state reconstruction with large numbers of sequences and edge-length estimation

Uses Software

• phangorn
• TreeFix
• TERA

Cites Work

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