OMGS: optical map-based genome scaffolding

DOI10.1007/978-3-030-17083-7_12zbMath1412.92208OpenAlexW4255331114MaRDI QIDQ2415267

Tao Jiang, Weihua Pan, Stefano Lonardi

Publication date: 21 May 2019

Full work available at URL: https://doi.org/10.1007/978-3-030-17083-7_12

zbMATH Keywords

combinatorial optimizationscaffoldingde novo genome assemblyoptical maps

Mathematics Subject Classification ID

Combinatorial optimization (90C27) Genetics and epigenetics (92D10)

Related Items (2)

Fast and efficient Rmap assembly using the bi-labelled de Bruijn graph ⋮ OMGS

Uses Software

• SOPRA
• SCARPA
• GRASS
• SOAPdenovo
• ABySS
• Bambus 2
• ALLMAPS
• Pilon
• DBG2OLC
• Unnamed Item

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