Algebraic systems biology: a case study for the Wnt pathway

DOI10.1007/s11538-015-0125-1zbMath1356.92038arXiv1502.03188OpenAlexW1545394588WikidataQ40233580 ScholiaQ40233580MaRDI QIDQ257144

Bernd Sturmfels, Zvi Rosen, Elizabeth Gross, Heather A. Harrington

Publication date: 15 March 2016

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1502.03188

zbMATH Keywords

polyhedra\(\beta\)-catenin/wnt signalingalgebraic matroidsbiochemical reaction networksnonlinear algebrasteady-state variety

Mathematics Subject Classification ID

Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Computational methods for problems pertaining to biology (92-08) Varieties and morphisms (14A10)

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Uses Software

• Macaulay2
• PHCpack
• RAGlib
• Bertini
• Bertini.m2

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