Demographic inference using genetic data from a single individual: separating population size variation from population structure

DOI10.1016/j.tpb.2015.06.003zbMath1342.91033arXiv1412.1243OpenAlexW2951043881MaRDI QIDQ2631129

Lounès Chikhi, Willy Rodríguez, Olivier Mazet

Publication date: 28 July 2016

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1412.1243

zbMATH Keywords

maximum likelihood estimationcoalescence timedemographic historypopulation size changesymmetric island model

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Mathematical geography and demography (91D20)

Related Items (2)

Testing for population decline using maximal linkage disequilibrium blocks ⋮ Coalescence times for three genes provide sufficient information to distinguish population structure from population size changes

Uses Software

• SciPy
• Geneland
• STRUCTURE
• BAPS 2

Cites Work

• The number of heterozygous loci between two randomly chosen completely linked sequences of loci in two subdivided population models
• Probability Models for DNA Sequence Evolution
• A Simplex Method for Function Minimization
• A new look at the statistical model identification
• Unnamed Item

This page was built for publication: Demographic inference using genetic data from a single individual: separating population size variation from population structure