A stochastic automata network descriptor for Markov chain models of instantaneously coupled intracellular Ca\(^{2+}\) channels

DOI10.1016/j.bulm.2004.08.010zbMath1334.92144OpenAlexW1968004732WikidataQ46430059 ScholiaQ46430059MaRDI QIDQ263450

Vien Nguyen, Gregory D. Smith, Roy Mathias

Publication date: 5 April 2016

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.bulm.2004.08.010

zbMATH Keywords

intracellular Ca\(^{2+}\)single-channel gating stochastic automata networks

Mathematics Subject Classification ID

Neural networks for/in biological studies, artificial life and related topics (92B20) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Biochemistry, molecular biology (92C40) Cellular automata (computational aspects) (68Q80)

Related Items (11)

Waiting time distributions for clusters of IP\(_3\) receptors ⋮ The dynamics of luminal depletion and the stochastic gating of \(\operatorname{Ca}^{2 +} \)-activated \(\operatorname{Ca}^{2 +}\) channels and release sites ⋮ \(\mathrm{Ca}^{2+}\)-activation kinetics modulate successive puff/spark amplitude, duration and inter-event-interval correlations in a Langevin model of stochastic \(\mathrm{Ca}^{2+}\) release ⋮ Primary cilium: a paradigm for integrating mathematical modeling with experiments and numerical simulations in mechanobiology ⋮ Measuring edge importance: a quantitative analysis of the stochastic shielding approximation for random processes on graphs ⋮ Stochastic Petri net models of \(\text{Ca}^{2+}\) signaling complexes and their analysis ⋮ Modeling local and global intracellular calcium responses mediated by diffusely distributed inositol 1,4,5-trisphosphate receptors ⋮ Calcium-dependent inactivation and the dynamics of calcium puffs and sparks ⋮ A computational analysis of localized \(\text{Ca}^{2+}\)-dynamics generated by heterogeneous release sites ⋮ Modelling of Biochemical Reactions by Stochastic Automata Networks ⋮ Reduction of calcium release site models via fast/slow analysis and iterative aggregation/disaggregation

This page was built for publication: A stochastic automata network descriptor for Markov chain models of instantaneously coupled intracellular Ca\(^{2+}\) channels