Secondary structure ensemble analysis via community detection

DOI10.1007/978-3-030-57129-0_4zbMath1460.92155OpenAlexW3118209364MaRDI QIDQ2658312

Yanyan Li

Publication date: 19 March 2021

Full work available at URL: https://doi.org/10.1007/978-3-030-57129-0_4

zbMATH Keywords

network analysiscommunity detectiongraph clusteringGibbs ensembleRNA secondary structureBoltzmann probability

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Cites Work

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• A Mathematical Theory of Communication
• The maximum flow problem with disjunctive constraints
• Graph clustering
• RNA secondary structure: a complete mathematical analysis
• On Finding All Suboptimal Foldings of an RNA Molecule
• Algorithms for Loop Matchings
• Community structure in social and biological networks

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