A time series representation of protein sequences for similarity comparison

DOI10.1016/J.JTBI.2022.111039zbMath1483.92105OpenAlexW4207065104MaRDI QIDQ2670184

Qi Dai, Cancan Li, Ping-an He

Publication date: 10 March 2022

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2022.111039

zbMATH Keywords

time seriesHungarian algorithmcoronavirusessubstitution matrixDTW algorithm

Mathematics Subject Classification ID

Problems related to evolution (92D15) Protein sequences, DNA sequences (92D20)

Related Items (1)

Protein Sequence Comparison Method Based on 3-ary Huffman Coding

Uses Software

• dtw
• ClustalW

Cites Work

• A novel model for protein sequence similarity analysis based on spectral radius
• A novel descriptor of protein sequences and its application

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