Reading frame retrieval of genes: a new parameter of codon usage based on the circular code theory

DOI10.1007/s11538-023-01129-4OpenAlexW4300485762MaRDI QIDQ2687725

Christian J. Michel, Jean-Sébastien Sereni

Publication date: 7 March 2023

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11538-023-01129-4

zbMATH Keywords

codon usagegene lengthcircular code theorycodon dispersionreading frame retrieval

Mathematics Subject Classification ID

Applications of graph theory (05C90) Protein sequences, DNA sequences (92D20)

Cites Work

• Circular codes, symmetries and transformations
• A 2006 review of circular codes in genes
• Varieties of comma-free codes
• A relation between trinucleotide comma-free codes and trinucleotide circular codes
• The relation between \(k\)-circularity and circularity of codes
• Mixed circular codes
• Identification of all trinucleotide circular codes
• n -Nucleotide circular codes in graph theory

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