Multiple Biological Sequence Alignment: Scoring Functions, Algorithms and Applications

DOI10.1002/9781119273769zbMath1344.92006OpenAlexW2482594335MaRDI QIDQ2819865

Xuan Guo, Ken Nguyen, Yi Pan

Publication date: 13 September 2016

Full work available at URL: https://doi.org/10.1002/9781119273769

zbMATH Keywords

multiple sequence alignmentnext generation sequencingscoring functions

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) General biostatistics (92B15) Neural biology (92C20) Biochemistry, molecular biology (92C40) Biomechanics (92C10) Introductory exposition (textbooks, tutorial papers, etc.) pertaining to biology (92-01) Software, source code, etc. for problems pertaining to biology (92-04)

Uses Software

• CUDA
• MAFFT
• Balibase
• 3DCoffee
• ProbCons
• DIALIGN
• ClustalW
• MUSCLE
• Kalign
• AVID
• SABmark
• PartTree