Estimating the Transmission Dynamics of Streptococcus pneumoniae from Strain Prevalence Data

DOI10.1111/biom.12040zbMath1418.92186OpenAlexW2142108063WikidataQ34791505 ScholiaQ34791505MaRDI QIDQ2861971

Mats Gyllenberg, Jukka Corander, Elina Numminen, Lu Cheng

Publication date: 13 November 2013

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1111/biom.12040

zbMATH Keywords

continuous-time Markov chainsepidemiologyBayesian inferencetransmission dynamicsmulti-strain models

Mathematics Subject Classification ID

Epidemiology (92D30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Monte Carlo methods (65C05)

Related Items

How direct competition shapes coexistence and vaccine effects in multi-strain pathogen systems, On predictive inference for intractable models via approximate Bayesian computation, Sequential Bayesian experimental design for implicit models via mutual information, Likelihood-free inference via classification, Efficient acquisition rules for model-based approximate Bayesian computation, Adaptive approximate Bayesian computation tolerance selection, Bayesian inference for multistrain epidemics with application to \textit{Escherichia coli} O157:H7 in feedlot cattle, Gaussian process emulators for spatial individual‐level models of infectious disease, Mathematical assessment of the impact of cohort vaccination on pneumococcal carriage and serotype replacement

Cites Work

• A stochastic model for head lice infections
• Epidemics with two levels of mixing
• Sequential Monte Carlo without likelihoods