Coupled Mesoscopic and Microscopic Simulation of Stochastic Reaction-Diffusion Processes in Mixed Dimensions

DOI10.1137/110832148zbMath1398.92097OpenAlexW1974341035WikidataQ63407440 ScholiaQ63407440MaRDI QIDQ2913939

Reas Hellander, Stefan Hellander, Per Loetstedt

Publication date: 21 September 2012

Published in: Multiscale Modeling & Simulation (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1137/110832148

zbMATH Keywords

coupled mesoscopic and microscopic simulationphosphorylation reactionsreaction and diffusion on membranesstochastic reaction-diffusion processes

Mathematics Subject Classification ID

Reaction-diffusion equations (35K57) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Numerical solutions to stochastic differential and integral equations (65C30)

Related Items (11)

Stochastic simulations of the Schnakenberg model with spatial inhomogeneities using reactive multiparticle collision dynamics ⋮ Simulation of stochastic diffusion via first exit times ⋮ Multiscale Simulation of Stochastic Reaction-Diffusion Networks ⋮ Efficient ensemble stochastic algorithms for agent-based models with spatial predator-prey dynamics ⋮ Coarse-graining and hybrid methods for efficient simulation of stochastic multi-scale models of tumour growth ⋮ Editorial: Special issue on stochastic modelling of reaction-diffusion processes in biology ⋮ Stochastic reaction-diffusion processes with embedded lower-dimensional structures ⋮ Stochastic Turing patterns: analysis of compartment-based approaches ⋮ Convergence of methods for coupling of microscopic and mesoscopic reaction-diffusion simulations ⋮ Hybrid approaches for multiple-species stochastic reaction-diffusion models ⋮ A hybrid method for micro-mesoscopic stochastic simulation of reaction-diffusion systems

Uses Software

• PPM

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