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Designing q-Unique DNA Sequences with Integer Linear Programs and Euler Tours in De Bruijn Graphs - MaRDI portal

Designing q-Unique DNA Sequences with Integer Linear Programs and Euler Tours in De Bruijn Graphs

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Publication:2918949

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DOI10.4230/OASIcs.GCB.2012.82zbMath1472.92162OpenAlexW2272723751MaRDI QIDQ2918949

Nils M. Kriege, Sven Rahmann, Marianna D'Addario

Publication date: 2 October 2012

Full work available at URL: http://dx.doi.org/10.4230/OASIcs.GCB.2012.82

zbMATH Keywords

de Bruijn graph quotient graph Euler graph Euler tour reverse complement DNA sequence design

Mathematics Subject Classification ID

Integer programming (90C10) Protein sequences, DNA sequences (92D20) Chemical graph theory (05C92)

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