Mathematical Models and Solutions for the Analysis of Human Genotypes

DOI10.1007/978-3-319-05254-0_6zbMath1323.92132OpenAlexW318930994MaRDI QIDQ2948975

Giuseppe Lancia

Publication date: 7 October 2015

Published in: Trends in Contemporary Mathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-319-05254-0_6

zbMATH Keywords

polymorphismshaplotypinghuman genotypes

Mathematics Subject Classification ID

Taxonomy, cladistics, statistics in mathematical biology (92B10) Genetics and epigenetics (92D10)

Uses Software

• RPOLY
• CollHaps

Cites Work

• Unnamed Item
• Unnamed Item
• The binary perfect phylogeny with persistent characters
• Solving haplotyping inference parsimony problem using a new basic polynomial formulation
• Handbook on modelling for discrete optimization.
• A polynomial case of the parsimony haplotyping problem
• A linear-time algorithm for the perfect phylogeny haplotype problem
• Haplotyping Populations by Pure Parsimony: Complexity of Exact and Approximation Algorithms
• A Class Representative Model for Pure Parsimony Haplotyping
• A Set-Covering Approach with Column Generation for Parsimony Haplotyping
• Stochastic local search for large-scale instances of the haplotype inference problem by pure parsimony
• Computational Methods for SNPs and Haplotype Inference
• Efficient Haplotype Inference with Pseudo-boolean Optimization

This page was built for publication: Mathematical Models and Solutions for the Analysis of Human Genotypes