Biosequence Time–Frequency Processing: Pathogen Detection and Identification

DOI10.1007/978-3-319-13230-3_3zbMath1328.92055OpenAlexW756655021MaRDI QIDQ2950245

Brian O'Donnell, Antonia Papandreou-Suppappola, Alexandre Maurer

Publication date: 8 October 2015

Published in: Excursions in Harmonic Analysis, Volume 3 (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-319-13230-3_3

zbMATH Keywords

identificationdetectionpathogentime-frequency processingepitopeimmunosignaturingrandom-sequence peptide microarray

Mathematics Subject Classification ID

Medical applications (general) (92C50) Protein sequences, DNA sequences (92D20)

Uses Software

• MEME
• BLAT
• SWIFT
• TEIRESIAS

Cites Work

• Sample size calculation for a regularized \(t\)-statistic in microarray experiments
• Spectrogram analysis of genomes
• Biological Sequence Analysis
• Waveform Mapping and Time-Frequency Processing of DNA and Protein Sequences
• Phase-only filtering for the masses (of DNA Data): a new approach to sequence alignment
• Matching pursuits with time-frequency dictionaries

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