Protein diffusion along DNA: on the effect of roadblocks and crowders

DOI10.1088/1751-8113/49/49/494003zbMath1355.92031OpenAlexW2553260120MaRDI QIDQ2960246

Dana Krepel, Yaakov Levy

Publication date: 8 February 2017

Published in: Journal of Physics A: Mathematical and Theoretical (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1088/1751-8113/49/49/494003

zbMATH Keywords

molecular dynamics simulationscoarse-grained modelDNA search

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Related Items (4)

Preface: Marian Smoluchowski’s 1916 paper—a century of inspiration ⋮ Random walks on quasi-one-dimensional lattices ⋮ Transcription factor target site search and gene regulation in a background of unspecific binding sites ⋮ Theoretical study of the role of dynamic bulk crowders in the protein search for targets on DNA

Cites Work

• How a protein searches for its site on DNA: the mechanism of facilitated diffusion

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