Phylogenetic Footprinting and Consistent Sets of Local Aligments

DOI10.1007/978-3-642-21458-5_12zbMath1339.92059OpenAlexW171425934WikidataQ56990685 ScholiaQ56990685MaRDI QIDQ3011848

Peter F. Stadler, Sonja J. Prohaska, Wolfgang Otto

Publication date: 29 June 2011

Published in: Combinatorial Pattern Matching (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-642-21458-5_12

zbMATH Keywords

combinatorial optimizationalignment consistencyphylogenetic footprinting

Mathematics Subject Classification ID

Problems related to evolution (92D15) Algorithms on strings (68W32)

Related Items (2)

Partially local multi-way alignments ⋮ Compositional properties of alignments

Uses Software

• PhyloGibbs
• DIALIGN
• T-coffee
• tracker2
• MEME

Cites Work

• An Exact Characterization of Greedy Structures
• Depth-First Search and Linear Graph Algorithms
• On a classification of independence systems

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