Stochastic model of homogeneous coding and latent periodicity in DNA sequences

DOI10.1016/J.JTBI.2015.11.014zbMath1343.92374OpenAlexW2185419537WikidataQ50757810 ScholiaQ50757810MaRDI QIDQ304826

Vladimir Kutyrkin, Maria Chaley

Publication date: 26 August 2016

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2015.11.014

zbMATH Keywords

CDSlatent periodicitymodel of profile periodicityspectral-statistical approachstructural-stochastic coding

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

Uses Software

• KEGG

Cites Work

• The spectral envelope and its applications.
• Prediction of protein coding regions by the 3-base periodicity analysis of a DNA sequence
• Model of perfect tandem repeat with random pattern and empirical homogeneity testing poly-criteria for latent periodicity revelation in biological sequences

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