BayesCAT: Bayesian co-estimation of alignment and tree

DOI10.1111/biom.12640zbMath1415.62135arXiv1411.6150OpenAlexW2267533067WikidataQ39014262 ScholiaQ39014262MaRDI QIDQ3119834

Bret Larget, Heejung Shim

Publication date: 13 March 2019

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1411.6150

zbMATH Keywords

treealignmentphylogenyBayesian inferenceMCMCphylogeneticsinsertion and deletion process

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Genetics and epigenetics (92D10)

Related Items (2)

BayesCAT ⋮ BayesCAT: Bayesian co-estimation of alignment and tree

Uses Software

• Statalign
• Bali-phy
• SATe

Cites Work

• Unnamed Item
• Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
• Inference from iterative simulation using multiple sequences
• Markov chains for exploring posterior distributions. (With discussion)
• Alignment Uncertainty and Genomic Analysis
• BayesCAT: Bayesian co-estimation of alignment and tree
• Biological Sequence Analysis

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