Scan statistics on Poisson random fields with applications in genomics

DOI10.1214/15-AOAS892zbMath1400.62300arXiv1406.3258MaRDI QIDQ312915

Benjamin Yakir, Li C. Xia, Nancy R. Zhang, David O. Siegmund

Publication date: 9 September 2016

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1406.3258

zbMATH Keywords

Poisson processesscan statisticschange-point detectionnext-generation sequencingstructural variation

Mathematics Subject Classification ID

Random fields; image analysis (62M40) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)

Related Items (4)

Scan statistics on Poisson random fields with applications in genomics ⋮ Translocation Detection from Hi-C Data via Scan Statistics ⋮ Multidimensional multiscale scanning in exponential families: limit theory and statistical consequences ⋮ Segmentation and estimation of change-point models: false positive control and confidence regions

Uses Software

• seqCBS
• Delly
• Pindel

Cites Work

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