A multilevel model to address batch effects in copy number estimation using SNP arrays

DOI10.1093/BIOSTATISTICS/KXQ043zbMath1437.62601OpenAlexW2105324757WikidataQ34425384 ScholiaQ34425384MaRDI QIDQ3303648

Robert B. Scharpf, Aravinda Chakravarti, Betty Doan, Benilton Carvalho, Ingo Ruczinski

Publication date: 4 August 2020

Published in: Biostatistics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1093/biostatistics/kxq043

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10)

Uses Software

• Unnamed Item
• PLASQ
• crlmm
• CARAT

Cites Work

• Hidden Markov models for the assessment of chromosomal alterations using high-throughput SNP arrays
• A statistical framework for the analysis of microarray probe-level data
• PLASQ: a generalized linear model-based procedure to determine allelic dosage in cancer cells from SNP array data
• Unnamed Item

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