An Efficient Approach to Merging Paired-End Reads and Incorporation of Uncertainties

DOI10.1007/978-3-319-59826-0_13zbMath1461.68264OpenAlexW2755836740MaRDI QIDQ3305539

Jiajie Zhang, Tomáš Flouri, Lucas Czech, Kassian Kobert, Alexandros Stamatakis

Publication date: 7 August 2020

Published in: Algorithms for Next-Generation Sequencing Data (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-319-59826-0_13

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Algorithms on strings (68W32)

Uses Software

• Bowtie 2
• PANDAseq
• VSEARCH
• PEAR
• FLASH

Cites Work

• Algorithms on Strings, Trees and Sequences
• Error Detecting and Error Correcting Codes
• Unnamed Item

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