Tabu search algorithm for DNA sequencing by hybridization with multiplicity information available

DOI10.1016/j.cor.2014.01.007zbMath1348.92119OpenAlexW2068443989MaRDI QIDQ337001

Piotr Formanowicz, Kamil Kwarciak

Publication date: 10 November 2016

Published in: Computers \& Operations Research (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.cor.2014.01.007

zbMATH Keywords

tabu searchmetaheuristicrepetitionsmultiplicity informationsequencing by hybridization

Mathematics Subject Classification ID

Approximation methods and heuristics in mathematical programming (90C59) Protein sequences, DNA sequences (92D20)

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Uses Software

• Tabu search

Cites Work

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• Evolutionary approaches to DNA sequencing with errors
• Dealing with repetitions in sequencing by hybridization
• Complexity of DNA sequencing by hybridization.
• Tabu search for DNA sequencing with false negatives and false positives
• Hybrid genetic algorithm for DNA sequencing with errors
• A greedy algorithm for the DNA sequencing by hybridization with positive and negative errors and information about repetitions
• DNA Sequencing—Tabu and Scatter Search Combined

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