Stable Computation of Probability Densities for Metastable Dynamical Systems

DOI10.1137/060675423zbMath1142.65100OpenAlexW2102343915WikidataQ57981965 ScholiaQ57981965MaRDI QIDQ3503937

Lionel Walter, Marcus Weber, Susanna Kube, Peter Deuflhard

Publication date: 10 June 2008

Published in: Multiscale Modeling & Simulation (Search for Journal in Brave)

Full work available at URL: https://infoscience.epfl.ch/record/147935/files/ZR-06-39.pdf

zbMATH Keywords

samplingalgorithmtransition probability matrixdynamical systemsnumerical exampleseigenvectordomain decompositionmetastabilitycluster analysisHamiltonian systemill-conditioned problemaggregation/disaggregationmolecular conformationsbiomolecular examples

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Numerical computation of eigenvalues and eigenvectors of matrices (65F15) Numerical methods for Hamiltonian systems including symplectic integrators (65P10) Discretization methods and integrators (symplectic, variational, geometric, etc.) for dynamical systems (37M15) Stability theory for smooth dynamical systems (37C75)

Related Items (2)

\textsf{ZIBgridfree}: efficient conformational analysis by partition-of-unity coupling ⋮ Identifying almost invariant sets in stochastic dynamical systems

Uses Software

• ZIBgridfree
• tsbridge

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