Partitioning a PPI network into overlapping modules constrained by high-density and periphery tracking

DOI10.5402/2012/726429zbMath1268.92046OpenAlexW2148572632WikidataQ58691863 ScholiaQ58691863MaRDI QIDQ355926

Shigehiko Kanaya, Masayoshi Wada, Md. Altaf-Ul-Amin

Publication date: 25 July 2013

Published in: ISRN Biomathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.5402/2012/726429

Mathematics Subject Classification ID

Applications of graph theory (05C90) Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08) Systems biology, networks (92C42)

Uses Software

• GOstats
• MCODE
• DPClus

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