CONTRAlign: Discriminative Training for Protein Sequence Alignment

DOI10.1007/11732990_15zbMath1302.92098OpenAlexW1489075871MaRDI QIDQ3596279

Samuel S. Gross, Serafim Batzoglou, Chuong B. do

Publication date: 30 August 2007

Published in: Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/11732990_15

zbMATH Keywords

secondary structureprotein sequence alignmentCONTRAlign

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Related Items (3)

A sum-over-paths extension of edit distances accounting for all sequence alignments ⋮ Counting, Generating, Analyzing and Sampling Tree Alignments ⋮ Counting, Generating and Sampling Tree Alignments

Uses Software

• MAFFT
• CONTRAlign

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