The Geometry of the Neighbor-Joining Algorithm for Small Trees

DOI10.1007/978-3-540-85101-1_7zbMath1171.92331arXiv0908.0098OpenAlexW1545906316MaRDI QIDQ3599195

Kord Eickmeyer, Ruriko Yoshida

Publication date: 3 February 2009

Published in: Algebraic Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/0908.0098

Mathematics Subject Classification ID

Problems related to evolution (92D15) Computational aspects related to convexity (52B55)

Related Items (3)

Optimality of the neighbor joining algorithm and faces of the balanced minimum evolution polytope ⋮ Modeling the distribution of distance data in Euclidean space ⋮ Mathematical and simulation-based analysis of the behavior of admixed taxa in the neighbor-joining algorithm

Uses Software

• polymake

Cites Work

• On the uniqueness of the selection criterion in neighbor-joining
• The performance of neighbor-joining methods of phylogenetic reconstruction
• Lectures on Polytopes
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