Nonparametric Testing for DNA Copy Number Induced Differential mRNA Gene Expression

DOI10.1111/j.1541-0420.2008.01052.xzbMath1159.62087OpenAlexW2061908600WikidataQ43480931 ScholiaQ43480931MaRDI QIDQ3623736

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Publication date: 23 April 2009

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1111/j.1541-0420.2008.01052.x

zbMATH Keywords

integrationshrinkagenonparametric statisticspermutation testmicroarrayarray CGH

Mathematics Subject Classification ID

Nonparametric hypothesis testing (62G10) Applications of statistics to biology and medical sciences; meta analysis (62P10) Medical applications (general) (92C50) Biochemistry, molecular biology (92C40)

Related Items (5)

Estimation of a non-parametric variable importance measure of a continuous exposure ⋮ Sparse integrative clustering of multiple omics data sets ⋮ Modeling association between DNA copy number and gene expression with constrained piecewise linear regression splines ⋮ Penalized differential pathway analysis of integrative oncogenomics studies ⋮ A Class of Pseudolikelihood Ratio Tests for Homogeneity in Exponential Tilt Mixture Models

Uses Software

• CGHcall
• ACE-it

Cites Work

• Unnamed Item
• A Test for Partial Differential Expression
• DNA Microarray Experiments: Biological and Technological Aspects
• Averaged gene expressions for regression
• Circular binary segmentation for the analysis of array-based DNA copy number data
• Estimating the Proportion of True Null Hypotheses, with application to DNA Microarray Data
• Adaptive distribution-free tests

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