Fuzzy Genome Sequence Assembly for Single and Environmental Genomes

DOI10.1007/978-3-540-89968-6_2zbMath1181.92023OpenAlexW1592677571MaRDI QIDQ3652849

Gregory L. Vert, Monica Nicolescu, Frederick C. jun. Harris, Adrienne Breland, Sara Nasser

Publication date: 16 December 2009

Published in: Fuzzy Systems in Bioinformatics and Computational Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-540-89968-6_2

zbMATH Keywords

fuzzy clusteringfuzzy classification

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Fuzzy logic; logic of vagueness (03B52) Biochemistry, molecular biology (92C40) Systems biology, networks (92C42) Multivariate analysis and fuzziness (62H86)

Uses Software

• CAP3

Cites Work

• Fuzzy logic and approximate reasoning
• Interactive clustering and merging with a new fuzzy expected value
• On-line construction of suffix trees
• Combinatorial algorithms for DNA sequence assembly
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