Robust \(k\)-mer frequency estimation using gapped \(k\)-mers

DOI10.1007/S00285-013-0705-3zbMath1302.92102OpenAlexW2013887116WikidataQ41877961 ScholiaQ41877961MaRDI QIDQ404003

Mahmoud Ghandi, Michael A. Beer, Morteza Mohammad-Noori

Publication date: 29 August 2014

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s00285-013-0705-3

zbMATH Keywords

frequency estimationDNA sequencesDNA sequencestatistical learningoligomer\(k\)-mer

Mathematics Subject Classification ID

Theory of matrix inversion and generalized inverses (15A09) Protein sequences, DNA sequences (92D20) Computational methods for problems pertaining to biology (92-08)

Related Items (1)

Effective DNA binding protein prediction by using key features via Chou's general PseAAC

Cites Work

• Unnamed Item
• A diagonal form for the incidence matrices of \(t\)-subsets vs. \(k\)- subsets
• Regression and the Moore-Penrose pseudoinverse

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