Assessing Population Differentiation and Isolation from Single-Nucleotide Polymorphism Data

DOI10.1111/1467-9868.00357zbMath1067.62116OpenAlexW2081014442WikidataQ57259383 ScholiaQ57259383MaRDI QIDQ4672158

Ómar Gústafsson, Kári Stefánsson, George Nicholson, Frosti Jónsson, Albert V. Smith, Peter Donnelly

Publication date: 29 April 2005

Published in: Journal of the Royal Statistical Society Series B: Statistical Methodology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1111/1467-9868.00357

zbMATH Keywords

Markov chain Monte Carlo methodsBottleneckCoalescentDemographyFixation indicesPopulation histories

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Numerical analysis or methods applied to Markov chains (65C40) Genetics and epigenetics (92D10)

Related Items (9)

The multivariate Wright-Fisher process with mutation: moment-based analysis and inference using a hierarchical beta model ⋮ Estimation of the covariance structure from SNP allele frequencies ⋮ Drawing inferences about the coancestry coefficient ⋮ An approximate likelihood for genetic data under a model with recombination and population splitting ⋮ General theory for stochastic admixture graphs and \(F\)-statistics ⋮ A general framework for moment-based analysis of genetic data ⋮ Improving population-specific allele frequency estimates by adapting supplemental data: an empirical Bayes approach ⋮ Assessment of Population Structure and Its Effects on Genome-Wide Association Studies ⋮ A Beta-Mixture Model for Assessing Genetic Population Structure

Cites Work

• The coalescent in an island model of population subdivision with variation among demes.
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