Fundamentals of bioinformatics and computational biology. Methods and exercises in MATLAB

DOI10.1007/978-3-319-11403-3zbMATH Open1306.92001OpenAlexW2488566799MaRDI QIDQ484312

Gautam B. Singh

Publication date: 6 January 2015

Published in: Modeling and Optimization in Science and Technologies (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-319-11403-3

zbMATH Keywords

dynamic programmingBLASTmultiple sequence alignmentsequence alignmentphylogenetic treesphylogenetic reconstructionmicroarraysDNA sequencinggene expression omnibuslinkage analysisMarkov chain modelsbiolinguistic methodscell structurecentral dogma of molecular biologydot plotgene modelsgene ontology, sequence homologygenome viewerhidden Markov models for multiple sequence alignmentsmaximum likelihood methodsNeedleman-Wunsch algorithmnucleotide databasesparsimony treeprogressive alignment methodsprotein databasesscoring matricesSmith-Waterman algorithm

Mathematics Subject Classification ID

Problems related to evolution (92D15) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Genetics and epigenetics (92D10) Computational methods for problems pertaining to biology (92-08) Introductory exposition (textbooks, tutorial papers, etc.) pertaining to biology (92-01)

Uses Software

• Title not available (Why is that?)
• bioperl
• UniProt

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